biowonks bioinformatics tools
PFQL - Protein Feature Query Language
Parse SeqDepot standard output to make it compatible with PFQL
Helper package to deal with MiST3 API
Parse MiST3 standard output to make it compatible with PFQL
Node wrapper to SeqDepot API
Transform stream with complex filter for objects
Funcional way to filter array of object with complex association of AND, OR and NOT.
Bulk download for the Caltech ETDB
Super simple helper library to BLAST software from NCBI
2D cross correlation between ndarrays.
The goal here is to take advantage of Imod to make 1D pixel intensity profiles average in sideviews following a specific path (countour).
JS library to use Coinwarz API
TypeScript library to read phylogenetic trees in Newick
Typescript implementation of Regular Architectures
Typescript implementation of pouchDB instance loaded with the GTDB
Typescript library for Phylogenetic visualization using d3js and adapted from TnT.
Typescript package to access MiST3 API
A simple package to calculate aseq identifiers compatible with Biowonk projects (MiST3, SeqDepot and etc)
Module to read, manipulate and write phylogenetic trees. Written in TypeScript
A library to support headers compatible with BITK's standard.
Simple wrapper around loglevel to add color tags.
Command line interface to generate GeneHood dataset.