128 packages found
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JavaScript track viewer
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.fasta and .fastq parsers
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A unique visualisation of any large chunk of DNA or RNA residing in ASCII text files (such as FASTA, GBK etc and also just .txt like my hand-made test files), AminoSee is a way to render huge genomics files into a left-to-right top-bottom PNG linear image
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Command line interface to generate GeneHood dataset.
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Node program to run canvasXpress in the command line
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Streamable FASTQ parser
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A simple parser to convert VCF files to JSON
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an open source bioinformatics package for retrieving, processing and analyzing the sequences and structures of biomolecules, such as proteins and nucleotides.
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convert phred quality scores to and from other numerical representations
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Vue component to create a sequence multiple alignment in SVG
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Vue component for displaying tracks
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A grammar for describing microbial genotypes and phenotypes.
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Super simple helper library to BLAST software from NCBI
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LexiconMonoSeq, DOM Text based MSA visualization written in Javascript
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Find out who eats who in the world: what do rats (Rattus rattus) eat?, or what do hardhead catfish (Ariopsis felis) eat?. Data provided via Global Biotic Interactions (GloBI, https://globalbioticinteractions.org) .
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- eol
- encyclopedia of life
- sglobal biotic interactions
- species
- interactions
- bioinformatics
- browser
- ecology
- food web
- foodweb
- biodiversity
- big data
- small data
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Node.js module for working with the NCBI API (aka e-utils) using Streams.
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React component based on the EBI species icons
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GloBI utility javascript library
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Vue component for displaying phylogenetic trees
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Manage BED (Browser Extensible Data) files with Node.JS (Bioinformatics)